CDS

Accession Number TCMCG017C28169
gbkey CDS
Protein Id OMO66112.1
Location complement(join(3668..3850,3950..3985,4327..4388,4588..4666,4996..5070,5175..5334,5521..5777,6057..6260,7141..7914))
GeneID InterPro:IPR003228
Organism Corchorus olitorius
locus_tag COLO4_30763

Protein

Length 609aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01020784.1
Definition Transcription initiation factor TFIID [Corchorus olitorius]
Locus_tag COLO4_30763

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription initiation factor TFIID subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K03126        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
GOs GO:0000123        [VIEW IN EMBL-EBI]
GO:0000124        [VIEW IN EMBL-EBI]
GO:0000125        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0001085        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0001102        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003713        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005669        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006367        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006473        [VIEW IN EMBL-EBI]
GO:0006475        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009735        [VIEW IN EMBL-EBI]
GO:0009736        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009867        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010104        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016573        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0017025        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0018393        [VIEW IN EMBL-EBI]
GO:0018394        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0030914        [VIEW IN EMBL-EBI]
GO:0031248        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033276        [VIEW IN EMBL-EBI]
GO:0033613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043543        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0043966        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051090        [VIEW IN EMBL-EBI]
GO:0051091        [VIEW IN EMBL-EBI]
GO:0051123        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070297        [VIEW IN EMBL-EBI]
GO:0070461        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070897        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071368        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090575        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902493        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1905368        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGAAACTGCATCTTCTTCACCCTCTTCTTCGAAACCCATTCAGTCGCCAAATCCTATGATGATGGACCCTTCTTCATCAATAACGACGGGACCAACACCGTCATCATCGGCGGCGACTAATATTAATCCAGCGGCAACTCCACCGCCTACGGCTGCGACGACGACACAACAACCCACAACGAATACCTCAATTCTACCTCAAAACAATCACCCTTCTCCTCAAATCCCTCCTCCTTCTCCTTCCATTGACCCTTCACTGCAAAATCCACAGCAAAATTTACAACAACAACAGCAACAGCAAATCTCGCAAATTTCATCTCCACCTCTTCCACCTCTTCCCCAGCAGCAGCAGCAGCAGCAACAACAACAACAACTTTTGCAGCAACAACAAACGCAACAAAATGTCGCAGCTTTGTCGAATTTTCAAATCCAACAATCCCTTCAAAGATCCCCATCCATTTCACGCCTTAACCAACTCCAACAACAGCAGCAACAACAAAGCCAGCAGCAGCAGCAGCAACAACAACAGCAACAGTCTCCATATGGCAACGTCTTAAGACAACAAGCAGGGTTATATGGGCAAATGAATTTTGGTGGGTCAGCTTCAATTCAAGCAAACCAGCAACAAAACCAGCAGAATCAACAGATGGGAAATCCCAATTTATCAAGGTCAGGTTTAATTGGGCAGAGTGGTCATTTGCCGATGCTCAGTGGTGCTGCTGCAGCTGCTGCCGCTCAGTTTAGTTTGCAGTCTCATATTTTATCTTCGCCGAGGCAGAAAGCTGGCTTGCAAGGGTCTCAATTTCATGCGGGTAACCCTACTGGGCAATCTTTGCAAGGGATGCAGGCAATGGGGATGATGAATTTGAGCTCACAATTAAGGGCTAATGGAGCTCTGTATGCTCAACAGCGGATGACTGCGGGACAGATGAGGCAGCAGTTATCACAACAAACGCAACTAACATCTCCTCAGGTCCAAAGCTTACCAAGAACATCTTCCCAGGCATTTATGAACCCTCAGTTATCAGGCTTGGCTCAGAATGGACAAGCGGGTATGATACAGAACTCTCTCCTGCAGCAGCAGTGGTTGAAGCAGATGCCGTCAATGTCTGGTCCAGGCTCACCTTCATTCCGCCTTCAGAGGTCACAGGCCCTGTTGCAGCAGCAACTGGCTTCTTCTTCTCCTCAGTTGCACCAAAATTTGGCCTTGAACCCTCAACAATTGTCTCAGATGCCAGGACCTGCAGGCCAAAAGTCTCTGAGTTTGACAGGCTCACAGCCCGATGCAACTGCCTCTGGTACAACCACACCCGGGGGAAGTTCAAGCCAAGGAACTGAGGCAACTAATCAACTTCTTGGAAAGAGAAAAATACAGGATCTGGTTTCACAGGTTGATTCACAAGGAAAGCTGGAGCCAGAAGTTGAAGATCTACTTCTGGAGATTGCTGATGACTTCATAGACTCTGTGACTACATTTGCATGCAGTCTGGCGAAGCATAGGAAATCATCAACATTAGAGTCCAAGGATCTCTTACTACACTTAGAAAAAAATTGGCATTTGACTATTCCGGGATTTTCAAGCGAAGAGCGTAACCAAACAAGACCTTTATCAAGTGATCTACACAAGAAGCGTCTTGATATGATACGGGCACTGATGGATTCATCACAACCTGAAGCAAATGCAAACCATCCTAAAGAAATCATAAGACAAGGGATTGGCAACCCAGTTAGTGCTAACCATTTGATGAGACCTTCACCAAGTTCTGAGCAGTTGGTTTCACAAGCAGCTGGTTCACAAATGCTGCAGCAAATAACTCGGTATTGA
Protein:  
MAETASSSPSSSKPIQSPNPMMMDPSSSITTGPTPSSSAATNINPAATPPPTAATTTQQPTTNTSILPQNNHPSPQIPPPSPSIDPSLQNPQQNLQQQQQQQISQISSPPLPPLPQQQQQQQQQQQLLQQQQTQQNVAALSNFQIQQSLQRSPSISRLNQLQQQQQQQSQQQQQQQQQQQSPYGNVLRQQAGLYGQMNFGGSASIQANQQQNQQNQQMGNPNLSRSGLIGQSGHLPMLSGAAAAAAAQFSLQSHILSSPRQKAGLQGSQFHAGNPTGQSLQGMQAMGMMNLSSQLRANGALYAQQRMTAGQMRQQLSQQTQLTSPQVQSLPRTSSQAFMNPQLSGLAQNGQAGMIQNSLLQQQWLKQMPSMSGPGSPSFRLQRSQALLQQQLASSSPQLHQNLALNPQQLSQMPGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQGKLEPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEKNWHLTIPGFSSEERNQTRPLSSDLHKKRLDMIRALMDSSQPEANANHPKEIIRQGIGNPVSANHLMRPSPSSEQLVSQAAGSQMLQQITRY